What this resource does
Core uses
About this resource
ClawBio combines a local Python bioinformatics library and CLI with agent-routable Skills for genomics, pharmacogenomics, ancestry, single-cell analysis, metagenomics, and related biomedical workflows.
This page groups representative academic components by task; review the repository for the complete inventory.
Variant and pharmacogenomic analysis
Provides Skills for variant annotation, rare-variant reporting, pharmacogenomic interpretation, and related genomic reports.
- Typical inputs
- Compatible VCF or supported genotype input; Selected analysis and output location
- Output
- A component-dependent variant or pharmacogenomic report and supporting artifacts.
Best for: Research analysis of genomic variants with appropriate domain review.
Components for this task
RNA and single-cell workflows
Includes components for RNA-seq differential expression, single-cell orchestration, embedding, and related analysis.
- Typical inputs
- Compatible count matrices, metadata, or sequencing project files
- Output
- A component-dependent analysis directory, tables, figures, or report.
Best for: Bioinformatics projects with prepared data and a defined analysis question.
Components for this task
Reproducible local Skill execution
Runs named Skills through a local CLI or Python API and records inspectable files and commands.
- Typical inputs
- Skill name, input arguments, and output directory
- Output
- Local files, reports, logs, and replay information for the selected Skill.
Best for: Researchers who want a direct local route without a chat interface.
Component for this task
Suggested workflow requests (2)
Run the pharmacogenomics demo and save its report to a new output directory.
List the available ClawBio Skills and show which inputs each selected Skill expects.
Adapted into complete requests from official trigger wording in README.md.
Use boundaries
Limits and checks
Sensitive genomic data
Files or configured services may expose highly sensitive data.
Use approved local environments, minimise identifiers, and check whether the selected Skill calls a hosted API.
Reference and method changes
Results can differ by version or become outdated.
Record versions and reference data and review interpretation with a domain specialist.
Optional hosted services
Data handling, availability, and cost differ from the local workflows.
Read the selected SKILL.md and provider terms before sending data.
More boundaries
- Do not use a ClawBio workflow with an unsupported biological file type or without the required reference data and tools.
- A generated genomic or pharmacogenomic report is not a clinical diagnosis or treatment recommendation.
- Local replay artifacts do not by themselves prove that a biological method or result is valid.
Technical details
- Resource type
- Toolkit
- Author or maintainer
- ClawBio
- Latest release
- v0.5.2: pip install clawbio (v0.5.2)
- Source last updated
- 14 Jul 2026
- Last verified
- 15 Jul 2026
- Documented applications
- Claude Code, OpenClaw, ClawBio CLI and Python library, RoboTerri
- Documented AI models
- Claude, ChatGPT, Ollama-hosted models
- Licence
- MIT
- Access
- Publicly available
- Additional costs
- Platform terms or usage limits may apply. API usage fees may apply for selected components. External services, software, compute, or data access may have separate costs.
- Skill instruction language
- English
- Documentation language
- English
- Repository languages
- Python, Markdown
- Dependencies
- Python 3.11 or later; Skill-specific Python packages, bioinformatics tools, reference data, or hosted APIs
- Review status
- Not tested
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